61 research outputs found

    aDORe djatoka: An Open-Source Jpeg 2000 Image Server and Dissemination Service Framework

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    4th International Conference on Open RepositoriesThis presentation was part of the session : Conference PresentationsDate: 2009-05-19 03:00 PM – 04:30 PMThe JPEG 2000 image format has attracted considerable attention due to its rich feature set defined in a multi-part open ISO standard, and its potential use as a holy-grail preservation format providing both lossless compression and rich service format features. Until recently there was lack of an implementation agnostic (e.g., Kakadu, Aware, etc) API for JPEG 2000 compression and extraction, and an open-source service framework, upon which rich Web 2.0-style applications can be developed. Recently we engaged in the development of aDORe djatoka , an open-source JPEG 2000 image server and dissemination framework to help address some of these issues. The djatoka image server is geared towards Web 2.0 style reuse through URI-addressability of all image disseminations including regions, rotations, and format transformations. Djatoka also provides a JPEG 2000 compression / extraction API that serves as an abstraction layer from the underlying JPEG 2000 library (e.g., Kakadu, Aware, etc).  The initial release has attracted considerable interest and is already being used in production environments, such as at the Biodiversity Heritage Library , who uses djatoka to serve more than eleven million images. This presentation introduces the aDORe djatoka image server and describes various interoperability approaches with existing repository systems.  Djatoka was derived from a concrete need to introduce a solution to disseminate high-resolution images stored in an aDORe repository system.  Djatoka is able to disseminate images that reside either in a repository environment or that are Web-accessible at arbitrary URIs.  Since dynamic service requests pertaining to an identified resource (the entire JPEG 2000 image) are being made, the OpenURL Framework was selected to provide an extensible dissemination service framework. The OpenURL service layer simplifies development and provides exciting interoperability opportunities. The presentation will showcase the flexibility of this interface by introducing a mobile image collection viewer developed for the iPhone / iTouch platform

    A principal component analysis of 39 scientific impact measures

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    The impact of scientific publications has traditionally been expressed in terms of citation counts. However, scientific activity has moved online over the past decade. To better capture scientific impact in the digital era, a variety of new impact measures has been proposed on the basis of social network analysis and usage log data. Here we investigate how these new measures relate to each other, and how accurately and completely they express scientific impact. We performed a principal component analysis of the rankings produced by 39 existing and proposed measures of scholarly impact that were calculated on the basis of both citation and usage log data. Our results indicate that the notion of scientific impact is a multi-dimensional construct that can not be adequately measured by any single indicator, although some measures are more suitable than others. The commonly used citation Impact Factor is not positioned at the core of this construct, but at its periphery, and should thus be used with caution

    The aDORe Federation Architecture

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    The need to federate repositories emerges in two distinctive scenarios. In one scenario, scalability-related problems in the operation of a repository reach a point beyond which continued service requires parallelization and hence federation of the repository infrastructure. In the other scenario, multiple distributed repositories manage collections of interest to certain communities or applications, and federation is an approach to present a unified perspective across these repositories. The high-level, 3-Tier aDORe federation architecture can be used as a guideline to federate repositories in both cases. This paper describes the architecture, consisting of core interfaces for federated repositories in Tier-1, two shared infrastructure components in Tier-2, and a single-point of access to the federation in Tier-3. The paper also illustrates two large-scale deployments of the aDORe federation architecture: the aDORe Archive repository (over 100,000,000 digital objects) at the Los Alamos National Laboratory and the Ghent University Image Repository federation (multiple terabytes of image files).Comment: 43 pages, 4 figures, 2 table

    Implementation of a Quality and Patient Safety Curriculum for Pathology Residency Training

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    Quality and Patient Safety education for resident physicians is necessary to prepare them for independent practice and to meet accreditation requirements. Integrating such education into the residents' routine work can provide them with valuable practical experience, while advancing the institution's quality priorities. We committed to Quality and Patient Safety education for our pathology residents but found no published program that met their specific needs. To fill this gap in pathology residency education, we designed and implemented a new curriculum that spans the 4-year duration of residency training. Curriculum content was drawn from the pathology milestones, and educational strategies were based on the principles of adult learning. The curriculum was implemented in the 2018 to 19 academic year, and residents were assessed before and after their participation. The residents engaged in several Quality and Patient Safety activities and projects under faculty supervision, and improved their scores on objective assessments (Quality and Patient Safety quiz and in-service examination). Implementation was facilitated by a Quality and Patient Safety chief resident, and the recruitment of faculty with demonstrated Quality and Patient Safety interest. Our comprehensive Quality and Patient Safety curriculum is feasible to implement and can help pathology residents develop the knowledge and skills needed to lead quality initiatives. We believe that the curriculum framework is readily adaptable to other residency programs

    Clickstream data yields high-resolution maps of science.

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    BACKGROUND: Intricate maps of science have been created from citation data to visualize the structure of scientific activity. However, most scientific publications are now accessed online. Scholarly web portals record detailed log data at a scale that exceeds the number of all existing citations combined. Such log data is recorded immediately upon publication and keeps track of the sequences of user requests (clickstreams) that are issued by a variety of users across many different domains. Given these advantages of log datasets over citation data, we investigate whether they can produce high-resolution, more current maps of science. METHODOLOGY: Over the course of 2007 and 2008, we collected nearly 1 billion user interactions recorded by the scholarly web portals of some of the most significant publishers, aggregators and institutional consortia. The resulting reference data set covers a significant part of world-wide use of scholarly web portals in 2006, and provides a balanced coverage of the humanities, social sciences, and natural sciences. A journal clickstream model, i.e. a first-order Markov chain, was extracted from the sequences of user interactions in the logs. The clickstream model was validated by comparing it to the Getty Research Institute's Architecture and Art Thesaurus. The resulting model was visualized as a journal network that outlines the relationships between various scientific domains and clarifies the connection of the social sciences and humanities to the natural sciences. CONCLUSIONS: Maps of science resulting from large-scale clickstream data provide a detailed, contemporary view of scientific activity and correct the underrepresentation of the social sciences and humanities that is commonly found in citation data
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